Posts Tagged ‘Wheat’

Scientists use DNA fingerprinting to gauge the spread of modern wheat in Afghanistan

New study finds that wheat farmers often do not accurately identify their varieties.

Wheat is Afghanistan’s number-one staple crop, but the country does not grow enough and must import millions of tons of grain each year to satisfy domestic demand.

Despite the severe social and political unrest that constrain agriculture in Afghanistan, many farmers are growing high-yielding, disease resistant varieties developed through international, science-based breeding and made available to farmers as part of partnerships with national wheat experts and seed producers.

These and other findings have emerged from the first-ever large-scale use of DNA fingerprinting to assess Afghanistan farmers’ adoption of improved wheat varieties, which are replacing less productive local varieties and landraces, according to a paper published yesterday in the science journal BMC Genomics.

The study is part of an activity supported between 2003 and 2018 by the Australian Department of Foreign Affairs and Trade, through which the Agricultural Research Institute of Afghanistan and the International Maize and Wheat Improvement Center (CIMMYT) introduced, tested, and released improved wheat varieties.

“As part of our study, we established a ‘reference library’ of released varieties, elite breeding lines, and Afghan wheat landraces, confirming the genetic diversity of the landraces and their value as a genetic resource,” said Susanne Dreisigacker, wheat molecular breeder at CIMMYT and lead author of the new paper.

“We then compared wheat collected on farmers’ fields with the reference library. Of the 560 wheat samples collected in 4 provinces during 2015-16, farmers misidentified more than 40%, saying they were of a different variety from that which our DNA analyses later identified.”

Wheat is the most important staple crop in Afghanistan — more than 20 million of the country’s rural inhabitants depend on it — but wheat production is unstable and Afghanistan has been importing between 2 and 3 million tons of grain each year to meet demand.

Over half of the population lives below the poverty line, with high rates of malnutrition. A key development aim in Afghanistan is to foster improved agronomic practices and the use of high quality seed of improved wheat varieties, which together can raise yields by over 50%.

“Fungal diseases, particularly yellow rust and stem rust, pose grave threats to wheat in the country,” said Eric Huttner, research program manager for crops at the Australian Centre for International Agricultural Research (ACIAR) and co-author of the present paper. “It’s crucial to know which wheat varieties are being grown where, in order to replace the susceptible ones with high-performing, disease resistant varieties.”

Varietal adoption studies typically rely on questionnaires completed by breeders, extension services, seed producers, seed suppliers, and farmers, but such surveys are complicated, expensive, and often inaccurate.

“DNA fingerprinting resolves uncertainties regarding adoption and improves related socioeconomic research and farm policies,” Huttner explained, adding that for plant breeding this technology has been used mostly to protect intellectual property, such as registered breeding lines and varieties in more developed economies.

This new study was commissioned by ACIAR as a response to a request from the Government of Afghanistan for assistance in characterizing the Afghan wheat gene bank, according to Huttner.

“This provided the reference library against which farmers’ samples could be compared,” he explained. “Accurately identifying the varieties that farmers grow is key evidence on the impact of introducing improved varieties and will shape our future research

Joint research and development efforts involving CIMMYT, ACIAR, the Food and Agriculture Organization (FAO) of the United Nations, the International Centre of Agricultural Research in Dry Areas (ICARDA), French Cooperation, and Afghanistan’s Ministry of Agriculture, Irrigation and Livestock (MAIL) and Agricultural Research Institute (ARIA) have introduced more than 400 modern, disease-resistant wheat varieties over the last two decades. Nearly 75% of the wheat grown in the areas surveyed for this study comes from these improved varieties.

“New gene sequencing technologies are increasingly affordable and their cost will continue to fall,” said Dreisigacker. “Expanded use of DNA fingerprinting can easily and accurately identify the wheat cultivars in farmers’ fields, thus helping to target breeding, agronomy, and development efforts for better food security and farmer livelihoods.”


For more information, or to arrange interviews with the researchers, please contact:

Marcia MacNeil, Wheat Communications Officer, CIMMYT
M.MacNeil@cgiar.org, +52 (55) 5804 2004, ext. 2070

Rodrigo Ordóñez, Communications Manager, CIMMYT
r.ordonez@cgiar.org, +52 (55) 5804 2004, ext. 1167

About CIMMYT
The International Maize and Wheat Improvement Center (CIMMYT) is the global leader in publicly funded maize and wheat research and related farming systems. Headquartered near Mexico City, CIMMYT works with hundreds of partners throughout the developing world to sustainably increase the productivity of maize and wheat cropping systems, thus improving global food security and reducing poverty. CIMMYT is a member of CGIAR and leads the CGIAR Research Programs on Maize and Wheat, and the Excellence in Breeding Platform. The center receives support from national governments, foundations, development banks and other public and private agencies.

About ACIAR
As Australia’s specialist international agricultural research for development agency, the Australian Centre for International Agricultural Research (ACIAR) brokers and funds research partnerships between Australian scientists and their counterparts in developing countries. Since 1982, ACIAR has supported research projects in eastern and southern Africa, East Asia, South and West Asia and the Pacific, focusing on crops, agribusiness, horticulture, forestry, livestock, fisheries, water and climate, social sciences, and soil and land management. ACIAR has commissioned and managed more than 1,500 research projects in 36 countries, partnering with 150 institutions along with more than 50 Australian research organizations.

About Afghanistan’s Ministry of Agriculture, Irrigation and Livestock
The Ministry of Agriculture, Irrigation and Livestock (MAIL) of the Islamic Republic of Afghanistan works on the development and modernization of agriculture, livestock and horticulture. The ministry launches programs to support the farmers, manage natural resources, and strengthen agricultural economics. Its programs include the promotion and introduction of higher-value economic crops, strengthening traditional products, identifying and publishing farm-tailored land technologies, boosting cooperative programs, agricultural economics, and export with marketing.

Alternatives to burning can increase Indian farmers’ profits and cut pollution, new study shows

Published in Science, the article provides evidence for national policies that block stubble burning and promote no-till mechanization to manage crop residues.

This story by Mike Listman was originally posted on the website of the International Maize and Wheat Improvement Center (CIMMYT).

India’s farmers feed millions of people. (Photo: Dakshinamurthy Vedachalam)

The new study compares the costs and benefits of 10 distinct land preparation and sowing practices for northern India’s rice-wheat cropping rotations, which are spread across more than 4 million hectares. The direct seeding of wheat into unplowed soil and shredded rice residues was the best option — it raises farmers’ profits through higher yields and savings in labor, fuel, and machinery costs.

The study, conducted by a global team of eminent agriculture and environmental scientists, was led by researchers from The Nature Conservancy, the International Maize and Wheat Improvement Center (CIMMYT), the Indian Council of Agricultural Research (ICAR), the Borlaug Institute for South Asia (BISA) and the University of Minnesota.

A new economic study in the journal Science shows that thousands of farmers in northern India could increase their profits if they stop burning their rice straw and adopt no-till practices to grow wheat. Alternative farming practices could also cut farmers’ greenhouse gas emissions from on-farm activities by as much as 78% and help lower air pollution in cities like New Delhi.

A burning issue

To quickly and cheaply clear their fields to sow wheat each year, farmers in northern India burn an estimated 23 million tons of straw from their rice harvests. That enormous mass of straw, if packed into 20-kilogram 38-centimeter-high bales and piled on top of each other, would reach a height of over 430,000 kilometers — about 1.1 times the distance to the moon.

Regulations are in place in India to reduce agricultural fires but burning continues because of implementation challenges and lack of clarity about the profitability of alternate, no-burn farming.

Farmers have alternatives, the study shows. To sow wheat directly without plowing or burning rice straw, farmers need to purchase or rent a tractor-mounted implement known as the “Happy Seeder,” as well as attach straw shredders to their rice harvesters. Leaving straw on the soil as a mulch helps capture and retain moisture and also improves soil quality, according to M.L. Jat, CIMMYT Principal Scientist, cropping systems specialist and a co-author of the study.

A combine harvester (left) equipped with the Super Straw Management System, or Super SMS, works alongside a tractor fitted with a Happy Seeder. (Photo: Sonalika Tractors)

Win-win

The Science study demonstrates that it is possible to reduce air pollution and greenhouse gas emissions in a way that is profitable to farmers and scalable.

The paper shows that Happy Seeder-based systems are on average 10%–20% more profitable than straw burning options.

“Our study dovetails with 2018 policies put in place by the government of India to stop farmers from burning, which includes a US$166 million subsidy to promote mechanization to manage crop residues within fields,” said Priya Shyamsundar, Lead Economist, Global Science, of The Nature Conservancy and first author of the study.

Shyamsundar noted that relatively few Indian farmers currently sow their wheat using the Happy Seeder but manufacturing of the Seeder had increased in recent years. “Less than a quarter of the total subsidy would pay for widespread adoption of the Happy Seeder, if aided by government and NGO support to build farmer awareness and impede burning.”

“With a rising population of 1.6 billion people, South Asia hosts 40% of the world’s poor and malnourished on just 2.4% of its land,” said Jat, who recently received India’s prestigious Rafi Ahmed Kidwai Award for outstanding and impact-oriented research contributions in natural resource management and agricultural engineering. “Better practices can help farmers adapt to warmer winters and extreme, erratic weather events such as droughts and floods, which are having a terrible impact on agriculture and livelihoods. In addition, India’s efforts to transition to more sustainable, less polluting farming practices can provide lessons for other countries facing similar risks and challenges.”

In November 2017, more than 4,000 schools closed in Delhi due to seasonal smog. This smog increases during October and November when fields are burned. It causes major transportation disruptions and poses health risks across northern India, including Delhi, a city of more than 18 million people.

Some of these problems can be resolved by the use of direct sowing technologies in northwestern India.

“Within one year of our dedicated action using about US$75 million under the Central Sector Scheme on ‘Promotion of agriculture mechanization for in-situ management of crop residue in the states of Punjab, Haryana, Uttar Pradesh and NCT of Delhi,’ we could reach 0.8 million hectares of adoption of Happy Seeder/zero tillage technology in the northwestern states of India,” said Trilochan Mohapatra, director general of the Indian Council of Agricultural Research (ICAR). “Considering the findings of the Science article as well as reports from thousands of participatory validation trials, our efforts have resulted in an additional direct farmer benefit of US$131 million, compared to a burning option,” explained Mohapatra, who is also secretary of India’s Department of Agricultural Research and Education.

Read the full study in Science

This research was supported by the Susan and Craig McCaw Foundation, the Institute on the Environment at the University of Minnesota, the CGIAR Research Program on Wheat (WHEAT), and the CGIAR Research Program on Climate Change, Agriculture and Food Security (CCAFS). The Happy Seeder was originally developed through a project from the Australian Centre for International Agricultural Research (ACIAR).

For more information, or to arrange interviews with the researchers, please contact:

Rodrigo Ordóñez, Communications Manager, CIMMYT
r.ordonez@cgiar.org, +52 5558042004 ext. 1167


Wheat expert calls for global unity to avert future hunger crises

Adapted from original blog by Matt Hayes on the website of the Borlaug Global Rust Initiative (BGRI)

Maricelis Acevedo (left), associate director of science for Delivering Genetic Gains in Wheat and Ronnie Coffman (right), international professor of plant breeding and director of International Programs in the Cornell University College of Agriculture and Life Sciences. (Photo: L. McCandless/Cornell) 

A global alliance of countries and research institutions committed to sharing plant genetic material , including the International Maize and Wheat Improvement Center (CIMMYT) and Cornell University, has secured food access for billions of people, but a patchwork of legal restrictions threatens humanity’s ability to feed a growing global population.

That jeopardizes decades of hard-won food security gains, according to Ronnie Coffman, international professor of plant breeding and director of International Programs in the Cornell University College of Agriculture and Life Sciences (IP-CALS).

“Global food security depends on the free movement and open sharing of plant genetic resources,” Coffman said July 23 at the International Wheat Congress in Saskatoon, Saskatchewan. “Without a strong commitment to scientific exchange in support of global plant breeding efforts, we risk our ability to respond to current food crises and to protect future generations.”

Effective plant breeding programs depend on the exchange of seeds, pathogens, and plant genetic material – known as germplasm – between and among countries. Coordination among plant pathologists and breeders forms a symbiotic partnership as plant and disease specimens collected in countries around the world are sent to research institutions to be analyzed and tested. Those findings in turn inform the breeding of improved, location-specific crop varieties that are resistant to disease and adapted to increasingly unpredictable environmental conditions.

The Convention on Biological Diversity gives countries sovereign rights over their own biological resources. The multilateral treaty, signed in 1993, allows each state to draw up its own regulations. An update known as the Nagoya Protocol, ratified in 2014, has subjected plant breeders and the seed industry to increased legal wrangling. Some countries are particularly draconian in their enforcement, and without a universal legal framework, the uneven standards threaten to undermine scientific exchange, Coffman said.

He argued that current regulations bring international lawyers, accountants and bankers with little to no background in plant breeding onto the playing field of crop improvement to act as referees. The patchwork of laws and norms, which have grown increasingly complicated in recent years, hampers scientific advancement and ultimately harms the farmers who depend on improved crops.

Coffman called for an overhaul of international laws that regulate the sharing of plant genetic resources, and for plant scientists to advocate to protect the unimpeded exchange of material and knowledge.

“It takes an international community of scientists and genetic resources to fight pathogens like stem rust that do not respect international boundaries,” he said. “Stringent regulations and country-specific control are stifling the germplasm exchanges critical to agriculture and horticulture.”

The CGIAR system — and CIMMYT and ICARDA (International Center for Agricultural Research in the Dry Areas) in particular — are the conservators of enormous gene banks of germplasm. Those resources have been essential in improving many crops to fight biotic and abiotic stresses.

“Germplasm exchange and information sharing is paramount for global wheat improvement as they are the basis for much of the progress made,” said Hans Braun, director of CIMMYT’s Global Wheat Program and the CGIAR Research Program on Wheat. “Going forward, we must protect open access and exchange because the value of germplasm resources in national and international gene banks can only be realized when they are shared and used.”

Hunger and malnutrition cause 9 million deaths globally per year, a number that could skyrocket without an international effort to respond in unison. Annual global losses to crops like wheat could be devastating in the absence of germplasm and effective breeding programs.

Since 2008, the Cornell-led Borlaug Global Rust Initiative has spearheaded efforts to combat threats to global wheat production. There are now approximately 215 million hectares of wheat under cultivation worldwide, most of it genetically susceptible to one or more races of newly identified stem rust and yellow rust pathogens. Highly virulent races of rust pathogens can easily reduce yields by 10% or more. The 1953 rust epidemic in North America resulted in average yield losses of 40% across U.S. and Canadian spring wheat growing areas.  

As one part of its efforts to reduce the world’s vulnerability to wheat diseases, the Cornell-led Delivering Genetic Gain in Wheat (DGGW) project – funded by the Bill & Melinda Gates Foundation and UK Aid from the British people – collects samples of plant pathogens such as stem rust and yellow rust from 40 countries and analyzes them in biosafety testing labs in Minnesota, Denmark, Canada, Turkey, Ethiopia, Kenya and India.

Exchanging germplasm has allowed the DGGW project to take multiple approaches to achieving long-lasting resilience, from conventional breeding, to marker assisted selection and high-end basic science explorations. DGGW and its forerunner, the Durable Rust Resistance in Wheat project, have, since 2008, released more than 169 wheat varieties with increased yields and improved disease resistance in 11 at-risk countries, helping to improve smallholder farmers’ food security and livelihoods.

The DGGW relies on exchanges of germplasm and rust samples across international borders, and the project has encountered increased regulation in recent years, said Maricelis Acevedo, associate director of science for the DGGW and adjunct associate professor of plant pathology at Cornell.

“It takes an international community of scientists and genetic resources to fight pathogens like stem rust that know no international boundaries,” Acevedo said. “We must continue to protect — and use — those resources in our quest for global food security.”

Top scientists from CGIAR to present latest research at International Wheat Congress in Canada

More than 800 global experts will gather in Saskatoon to strategize on ways to meet projected nutritional needs of 60% more people by 2050.

SASKATOON, Canada (CIMMYT) — Amid global efforts to intensify the nutritional value and scale of wheat production, scientists from all major wheat growing regions in the world will gather from July 21 to 26, 2019 at the International Wheat Congress in Saskatoon, the city at the heart of Canada’s western wheat growing province, Saskatchewan. The CGIAR Research Program on Wheat (WHEAT), led by the International Maize and Wheat Improvement Center (CIMMYT), is a founding member of the G20 Wheat Initiative, a co-host of the conference.

Wheat provides 20% of all human calories consumed worldwide. In the Global South, it is the main source of protein and a critical source of life for 2.5 billion people who live on less than $2 (C$2.60) a day.

In spite of its key role in combating hunger and malnutrition, the major staple grain faces threats from climate change, variable weather, disease, predators and many other challenges. Wheat’s vital contribution to the human diet and farmer livelihoods makes it central to conversations about the rural environment, agricultural biodiversity and global food security.

More than 800 delegates, including researchers from the CGIAR Research Program on Wheat, CIMMYT, the International Center for Agricultural Research in the Dry Areas (ICARDA), the International Wheat Yield Partnership (IWYP), Cornell University’s Delivering Genetic Gain in Wheat project (DGGW), the University of Saskatchewan and many other organizations worldwide will discuss the latest research on wheat germplasm.

“We must solve a complex puzzle,” said Martin Kropff, CIMMYT’s director general. “Wheat must feed more people while growing sustainably on less land. Wheat demand is predicted to increase 60% in the next three decades, while climate change is putting an unprecedented strain on production.”

“The scientific community is tackling this challenge head-on, through global collaboration, germplasm exchange and innovative approaches. Researchers are looking at wheat’s temperature response mechanisms and using remote sensing, genomics, bio-informatics and other technologies to make wheat more tolerant to heat and drought,” Kropff said.

The congress is the first major gathering of the wheat community since the 2015 International Wheat Conference in Sydney, Australia.

CGIAR and CIMMYT scientists will share the latest findings on:

  • State-of-the-art approaches for measuring traits to speed breeding for heat and drought tolerance
  • Breeding durum (pasta) wheat for traits for use in bread products
  • New sources of diversity — including ancient wheat relatives — to create aphid-resistant wheat and other improved varieties
  • DNA fingerprinting to help national partners identify gaps in improved variety adoption

For more details on schedule and scientists’ presentations, click here.

Research shows that more than 60% of wheat varietal releases since 1994 were CGIAR-related.

Low- and middle-income countries are the primary focus and biggest beneficiaries of CGIAR wheat research, but high-income countries reap substantial rewards as well. In Canada, three-quarters of the wheat area is sown to CGIAR-related cultivars and in the United States almost 60% of the wheat area was sown to CGIAR-related varieties, according to the research.

  • WHEN: July 21-26, 2019
  • The opening ceremony and lectures will take place on Monday, July 22, 2019 from 08:50 to 10:50 a.m.
  • The Premier of Saskatchewan, Scott Moe, will give welcoming remarks at the opening ceremony. Other attending dignitaries include the Mayor of Saskatoon, Charlie Clark, and the President of the University of Saskatchewan, Peter Stoicheff.
  • Contacts: For further information, or to arrange interviews, please contact:
  • Marcia MacNeil: m.macneil@cgiar.org
  • Julie Mollins: j.mollins@cgiar.org

About CGIAR: CGIAR is a global research partnership for a food secure future dedicated to reducing poverty, enhancing food and nutrition security, and improving natural resources.

About the CGIAR Research Program on Wheat: Joining advanced science with field-level research and extension in lower- and middle-income countries, the Agri-Food Systems CGIAR Research Program on Wheat (WHEAT) works with public and private organizations worldwide to raise the productivity, production and affordable availability of wheat for 2.5 billion resource-poor producers and consumers who depend on the crop as a staple food. WHEAT is led by the International Maize and Wheat Improvement Center (CIMMYT), with the International Center for Agricultural Research in the Dry Areas (ICARDA) as a primary research partner. Funding for WHEAT comes from CGIAR and national governments, foundations, development banks and other public and private agencies, in particular the Australian Centre for International Agricultural Research (ACIAR), the UK Department for International Development (DFID) and the United States Agency for International Development (USAID). www.wheat.org

About CIMMYT: The International Maize and Wheat Improvement Center (CIMMYT) is the global leader in publicly funded maize and wheat research and related farming systems. Headquartered near Mexico City, CIMMYT works with hundreds of partners throughout the developing world to sustainably increase the productivity of maize and wheat cropping systems, thus improving global food security and reducing poverty. CIMMYT is a member of CGIAR and leads the CGIAR Research Programs on Maize and Wheat, and the Excellence in Breeding Platform. The center receives support from national governments, foundations, development banks and other public and private agencies.

Modern wheat breeding benefits high- and low-input farmers, study shows

Study results underscore the value of CIMMYT’s breeding programs.

Farmer Gashu Lema’s son harvests improved variety “Kubsa” wheat, Gadulla village, Mojo Ethiopia 2015. Photo: CIMMYT/P. Lowe

This story by Marcia MacNeil was originally posted on CIMMYT.org.

A recent article in the journal Nature Plants validates the work of wheat breeders who produce yield-boosting varieties for farmers across a range of incomes and environments. 

Based on a rigorous large-scale study spanning five decades of wheat breeding progress under cropping systems with low, medium and high fertilizer and chemical plant protection usage, the authors conclude that modern wheat breeding practices aimed at high-input farming systems have promoted genetic gains and yield stability across a wide range of environments and management conditions.

In other words, wheat breeding benefits not only large-scale and high-input farmers but also resource-poor, smallholder farmers who do not use large amounts of fertilizer, fungicide, and other inputs. 

This finding underscores the efficiency of a centralized breeding effort to improve livelihoods across the globe – the philosophy behind the breeding programs of the International Maize and Wheat Improvement Center (CIMMYT) over the past 50 years.

It also contradicts a commonly held belief that breeding for intensive systems is detrimental to performance under more marginal growing environments, and refutes an argument by Green Revolution critics that breeding should be targeted to resource-poor farmers.

In a commentary published in the same Nature Plants issue, two CIMMYT scientists — Hans Braun, director of CIMMYT’s global wheat program and the CGIAR Research Program on Wheat and Matthew Reynolds, CIMMYT wheat physiologist – note the significance of the study.

“Given that wheat is the most widely grown crop in the world, sown annually on around 220 million ha and providing approximately 20% of human calories and protein, the social and economic implications are large,“ they state.

Among other implications,

  • The study found that modern breeding has reduced groups of genes (haplotypes) with negative or neutral effects – a finding which will help breeders combine positive haplotypes in the future, including for hybrid breeding.
  • The study demonstrates the benefits of breeding for overall yield potential, which — given that wheat is grown over a wider range of environments, altitudes and latitudes than any other crop, with widely ranging agronomic inputs – has significant cost-saving implications.

Braun and Reynolds acknowledge that the longstanding beliefs challenged by this study have a range of influences, from concern about rural livelihoods, to the role of corporate agribusiness and the capacity of Earth’s natural resources to sustain 10 billion people. 

While they welcome the conclusions as a validation of their work, they warn against seeing the study as “a rubber stamp for all things ‘high-input’” and encourage openness to new ideas as the need arises.

“If the climate worsens, as it seems destined to, we must certainly be open to new ways of doing business in crop improvement, while having the common sense to embrace proven technologies, ” they conclude.   

CIMMYT global partnership fights mutating wheat rust

Kenya research station offers a unique wheat science platform with global impact

By Joshua Masinde

KALRO staff selecting and taping promising wheat plants with resistance to stem rust disease at the wheat stem rust phenotyping facility in Njoro. Photo: Joshua Masinde/CIMMYT.

Stem rust, which occurs mainly in warm and humid conditions, is a serious biotic threat to wheat that can destroy healthy plants just a few weeks before harvest, resulting in huge yield losses to farmers. Along with leaf rust and stripe rust, it is the among the world’s most threatening wheat fungal diseases, dreaded by farmers for centuries.

Two decades ago, a virulent race of stem rust — identified as Ug99 — was identified in Uganda. The race went on to cause major epidemics in Kenya in 2002 and 2004. It continues to evolve and emerge into new races. Ug99 and its variants have since spread across East African highlands to South Africa, and to Yemen and Iran, threatening regional food security.

To tackle this stem rust pathogen, the International Maize and Wheat Improvement Center (CIMMYT) and Cornell University established the International Stem Rust Phenotyping Platform in Njoro, Nakuru County, Kenya, in collaboration with the Kenya Agricultural and Livestock Research Organization (KALRO) through the Durable Rust Resistance in Wheat (DRRW) project in 2008.

Stem rust resistant (left) and susceptible (right) wheat plants at the stem rust phenotyping facility in Njoro, Nakuru County in Kenya. Photo: Joshua Masinde/CIMMYT.

Over the past decade, wheat breeders and pathologists have worked collaboratively at the facility to stay ahead of this fast-evolving wheat stem rust fungus. This partnership has resulted in the release of over 150 wheat lines around the world, with resistance to Ug99 and its variants. The development of these high-yielding varieties suitable to various agro-ecologies has been possible with support from the Bill & Melinda Gates Foundation and the UK Department for International Development (DFID) initially through the DRRW project, and presently as part of the Delivering Genetic Gain in Wheat (DGGW) project, managed by Cornell University.

Phenotyping – the use of field-testing technology to identify desired plant traits – is a core component in the facility. The facility uses the CIMMYT Mexico-Kenya shuttle breeding system to quickly evaluate and select wheat lines for stem rust resistance. It also evaluates wheat germplasm from different countries, and “mapping populations” — crosses of diverse parents — to identify and characterize new sources of rust resistance.  

Shuttle breeding

The CIMMYT Mexico-Kenya shuttle breeding system allows breeders to plant at two locations to rapidly advance new plant generations and expose the wheat to different stresses (abiotic and biotic). Testing in Obregon yields wheat lines adaptable to different agro-ecological zones, and with resistance to local races of leaf rust and stem rust pathogen, while additional testing in Kenya enhances stem rust resistance to Ug99 and its variants. This enables the Njoro facility to screen and select about 1,500-2,000 segregating wheat populations over the course of two seasons.

“Through the CIMMYT Mexico-Kenya shuttle breeding, continuous testing of wheat germplasm, speed breeding and use of modern marker technologies for genomic selection, we innovate continuously to develop improved wheat lines with a package of desired traits in a much shorter period of time,” explained Mandeep Randhawa, CIMMYT wheat breeder and wheat rust pathologist.

Scientists at the facility evaluate about 10,000 lines from yield trials for stem rust resistance over two seasons. The best performing lines undergo second year of yield tests under five different environments in Obregon, Mexico:  full irrigation, drought, flat bed, raised bed and heat stress. Breeders then select and compile high-yielding lines and distribute them as international nurseries to national partners with the help of CIMMYT’s germplasm bank.

Wheat plants infested with stem rust. Photo: Joshua Masinde/CIMMYT.

The Njoro screening facility has a capacity of testing 50,000 wheat lines in a year. As many as 20 countries send their germplasm to the facility for stem rust evaluation. About 600,000 wheat lines have been evaluated at Njoro over the last 10 years.

The critical challenge for breeders is to combine all desirable traits into single lines in a shorter period: say five, instead of 10 years. Such elaborate breeding efforts require sustained support and international cooperation to develop high-yielding stress resilient lines suited to various agro-ecologies. 

Training and capacity building for researchers and national programs

The Njoro facility plays a major capacity-building role for partner scientists, and MSc and PhD students. CIMMYT trains and equips early career scientists to better prepare them to deal with possible new epidemics, with an annual training targeting 20-25 early-career scientists from across the world. Last year’s training took place on October 1-9, 2018, as part of the Bill & Melinda Gates Foundation- and DFID-funded DGGW project (under the “talent pipeline” objective) managed through Cornell University.

In the last decade, CIMMYT has trained over 200 scientists from national research programs.

“In addition to imparting knowledge on new techniques in wheat breeding and genetics,” said Mandeep, “we normally use such opportunities to train the scientists on evaluating germplasm for stem rust resistance and standardizing stem rust note taking.”

“With such a partnership, it is easier and more cost-effective to train our local wheat researchers as opposed to sending them to all the way to Mexico. We have had a good number of young scientists trained at this facility as a result of this valuable partnership with CIMMYT,” said Ruth Wanyera, principal research scientist at KALRO.

Strengthening national programs better prepares them to put improved lines to appropriate use in the field – a core mandate of CIMMYT accomplished through the Njoro facility.

Biofortified maize and wheat can improve diets and health, new study shows

New varieties deliver essential micronutrients to those who lack diverse diets

This article was originally posted on June 3, 2019 by Mike LISTMAN on cimmyt.org

TEXCOCO, Mexico (CIMMYT) — More nutritious crop varieties developed and spread through a unique global science partnership are offering enhanced nutrition for hundreds of millions of people whose diets depend heavily on staple crops such as maize and wheat, according to a new study in the science journal Cereal Foods World.

From work begun in the late 1990s and supported by numerous national research organizations and scaling partners, more than 60 maize and wheat varieties whose grain features enhanced levels of zinc or provitamin A have been released to farmers and consumers in 19 countries of Africa, Asia, and Latin America over the last 7 years. All were developed using conventional cross-breeding.

Farmer and consumer interest has grown for some 60 maize and wheat varieties whose grain features enhanced levels of the essential micronutrients zinc and provitamin A, developed and promoted through collaborations of CIMMYT, HarvestPlus, and partners in 19 countries (Map: Sam Storr/CIMMYT).

“The varieties are spreading among smallholder farmers and households in areas where diets often lack these essential micronutrients, because people cannot afford diverse foods and depend heavily on dishes made from staple crops,” said Natalia Palacios, maize nutrition quality specialist at the International Maize and Wheat Improvement Center (CIMMYT) and co-author of the study.

More than 2 billion people worldwide suffer from “hidden hunger,” wherein they fail to obtain enough of such micronutrients from the foods they eat and suffer serious ailments including poor vision, vomiting, and diarrhea, especially in children, according to Wolfgang Pfeiffer, co-author of the study and head of research, development, delivery, and commercialization of biofortified crops at the CGIAR program known as “HarvestPlus.”

“Biofortification — the development of micronutrient-dense staple crops using traditional breeding and modern biotechnology — is a promising approach to improve nutrition, as part of an integrated, food systems strategy,” said Pfeiffer, noting that HarvestPlus, CIMMYT, and the International Institute of Tropical Agriculture (IITA) are catalyzing the creation and global spread of biofortified maize and wheat.

“Eating provitamin A maize has been shown to be as effective as taking Vitamin A supplements,” he explained, “and a 2018 study in India found that using zinc-biofortified wheat to prepare traditional foods can significantly improve children’s health.”

Six biofortified wheat varieties released in India and Pakistan feature grain with 6–12 parts per million more zinc than is found traditional wheat, as well as drought tolerance and resistance to locally important wheat diseases, said Velu Govindan, a breeder who leads CIMMYT’s work on biofortified wheat and co-authored the study.

“Through dozens of public–private partnerships and farmer participatory trials, we’re testing and promoting high-zinc wheat varieties in Afghanistan, Ethiopia, Nepal, Rwanda, and Zimbabwe,” Govindan said. “CIMMYT is also seeking funding to make high-zinc grain a core trait in all its breeding lines.”

Pfeiffer said that partners in this effort are promoting the full integration of biofortified maize and wheat varieties into research, policy, and food value chains. “Communications and raising awareness about biofortified crops are key to our work.”

For more information or interviews, contact:

Mike Listman

Communications Consultant

International Maize and Wheat Improvement Center (CIMMYT)  

m.listman@cgiar.org, +52 (1595) 957 3490

Rebuttal letter sets the record straight on crop breeding for climate change resilience

Crop scientists refute the flawed findings of a study questioning climate resilience in modern wheat breeding.

This article by Marcia MacNeil was originally posted on May 28, 2019 on cimmyt.org.

CIMMYT field workers working on wheat crossing as part of the breeding process. (Photo: CIMMYT)

In early 2019, an article published by European climate researchers in the Proceedings of the National Academy of Science (PNAS) journal questioned the climate resilience of modern wheat varieties. The article suggested that modern wheat varieties showed reduced climate resilience as a direct result of modern breeding methods and practices, a claim that researchers at the International Maize and Wheat Improvement Center (CIMMYT) vehemently rebuke

In a rebuttal letter published in the June issue of PNAS a group of scientists, including CIMMYT’s Susanne Dreisigacker and Sarah Hearne, strongly contradict the finding that breeding has reduced climate resilience in European wheat, citing significant flaws in the authors’ methodology, data analyses and interpretation.

“This article discredits European plant breeders and wheat breeders in general, who have been working over many decades to produce a wide range of regionally adapted, stable varieties which perform well under a broad range of climate change conditions,” said CIMMYT wheat molecular geneticist Susanne Dreisigacker.

Among other flaws, they found a number of omissions and inconsistencies.

  • The article shows a lack of understanding of commonly used terms and principles of breeding theory, criticizing newer wheat varieties for demonstrating a decrease in “climatic response diversity.” Less diversity in wheat response — that is, more stable yields despite the influence of climate change — is a benefit, not a threat, to farmers.
  • The article authors contradict the common knowledge among farmers and plant breeders that new elite wheat varieties are generally more productive than older varieties; new cultivars are only approved if they show added value in direct comparison to existing varieties.
  • The article’s claim of long-term losses of climate resilience in “European wheat” is unsubstantiated. The authors extensively used data from three small countries — the Czech Republic, Denmark and Slovakia — which contribute less than five percent of Europe’s wheat supply. Three of the five most important wheat producers in Europe — Russia, Ukraine and the United Kingdom — were not accounted for in the analysis.
  • The authors failed to report the actual wheat yields in their study, neglected to publish the underlying data with the manuscript and have up to now declined requests to make the data available.

Europe is one of the world’s major wheat producers and threats to its wheat production due to climate change would have serious consequences for world’s food security. Luckily, say the scientists who published the rebuttal letter, this fear is unfounded.

“Wheat producers and bread consumers around the world will be relieved to learn that breeders have not ignored climate change after all,” said letter lead-author Rod Snowdon, from the Department of Plant Breeding at Justus Liebig University of Giessen, Germany.

The full rebuttal letter by 19 international plant breeders, agronomists and scientists, is available on the PNAS site and reprinted in its entirety below.

Reduced response diversity does not negatively impact wheat climate resilience

Kahiluoto et al. (1) assert that climate resilience in European wheat has declined due to current breeding practices. To support this alarming claim, the authors report yield variance data indicating increasingly homogeneous responses to climatic fluctuations in modern wheat cultivars. They evaluated “response diversity,” a measure of responses to environmental change among different species jointly contributing to ecosystem functions (2). We question the suitability of this measure to describe agronomic fitness in single-cultivar wheat cropping systems. Conclusions are made about “long-term trends,” which in fact span data from barely a decade, corresponding to the duration of a single wheat breeding cycle. The authors furthermore acknowledge increasing climate variability during the study period, confounding their analysis of climate response in the same time span.

The underlying data are not published with the manuscript. Thus, the assertion that there is “no inherent trade-off between yield potential and diversity in weather responses” (1) cannot be verified. Inexplicably, the analysis and conclusions ignore absolute yields, which increase over time through breeding (3–6). Furthermore, incompatible data from completely different ecogeographical forms and species of wheat are apparently considered together, and the dataset is strongly biased toward a few small countries with minimal wheat production and narrow agroclimatic gradients.

The study assumes that increased response diversity among different cultivars is associated with yield stability. In contrast, the common, agronomic definition of yield stability refers to the ability of a single cultivar to stably perform well in diverse environments, without excessive responses to fluctuating conditions. Response diversity measures that ignore absolute yield do not support statements about food security or financial returns to farmers.

Cultivar yield potential, stability, and adaptation are enhanced by multienvironment selection over long breeding time frames, encompassing climate fluctuations and a multitude of other relevant environmental variables. Translation to on-farm productivity is promoted by national registration trials and extensive, postregistration regional variety trials in diverse environments. The unsurprising conclusion that planting multiple cultivars enhances overall production stability mirrors longstanding farming recommendations and practice (7). The availability of robust performance data from a broad range of high-performing cultivars enables European farmers to manage their production and income risks.

Kahiluoto et al. (1) speculate about “genetic erosion” of modern cultivars due to a “lack of incentives for breeders to introduce divergent material.” To substantiate these claims, the authors cite inadequate genetic data from non-European durum wheat (8), while explicitly dismissing clearly opposing findings about genetic diversity in European bread wheat (9). Short-term reductions in response diversity in five countries were misleadingly reported as a “long-term decline” in climate resilience in “most European countries,” although six out of seven countries with sufficient data showed no long-term decline. The article from Kahiluoto et al. and the misrepresentation of its results distorts decades of rigorous, successful breeding for yield potential and stability in European wheat and misleads farmers with pronouncements that are not supported by relevant data.

References:

1 H. Kahiluoto et al., Decline in climate resilience of European wheat. Proc. Natl. Acad. Sci. USA 116, 123–128 (2019).

2 T. Elmqvist et al., Response diversity, ecosystem change, and resilience. Front. Ecol. Environ. 1, 488–494 (2003).

3 S. De Schepper, M. De Loose, E. Van Bockstaele, P. Debergh, Ploidy analysis of azalea flower colour sports. Meded. Rijksuniv. Gent. Fak. Landbouwkd. Toegep. Biol. Wet. 66, 447–449 (2001).

4 I. Mackay et al., Reanalyses of the historical series of UK variety trials to quantify the contributions of genetic and environmental factors to trends and variability in yield over time. Theor. Appl. Genet. 122, 225–238 (2011).

5 F. Laidig et al., Breeding progress, environmental variation and correlation of winter wheat yield and quality traits in German official variety trials and on-farm during 1983-2014. Theor. Appl. Genet. 130, 223–245 (2017).

6 T. Würschum, W. L. Leiser, S. M. Langer, M. R. Tucker, C. F. H. Longin, Phenotypic and genetic analysis of spike and kernel characteristics in wheat reveals long-term genetic trends of grain yield components. Theor. Appl. Genet. 131, 2071–2084 (2018).

7 P. Annicchiarico, “Genotype x environment interactions: Challenges and opportunities for plant breeding and cultivar recommendations.” (Food and Agriculture 201 Organisation of the United Nations, Rome, Italy, 2002), FAO Plant Production and Protection Paper 174.

8 F. Henkrar et al., Genetic diversity reduction in improved durum wheat cultivars of Morocco as revealed by microsatellite markers. Sci. Agric. 73, 134–141 (2016).

9 M. van de Wouw, T. van Hintum, C. Kik, R. van Treuren, B. Visser, Genetic diversity trends in twentieth century crop cultivars: A meta analysis. Theor. Appl. Genet. 120, 1241–1252 (2010).

WHEAT contributes to G20 agricultural research agenda

Wheat spikes damaged by blast. Photo: CIMMYT

Lead agricultural scientists from G20 member countries gathered in Tokyo, Japan last month to discuss ways to promote science and technology as mechanisms to support the global food system.

The Meeting of Agricultural Chief Scientists (MACS), which took place on April 25-26 in Tokyo, focused on identifying global research priorities in agriculture and ways to facilitate collaboration among G20 members and with relevant stakeholders.  The purpose is to develop a global agenda ahead of the May 11-12 meeting of G20 Agricultural Ministers.

CGIAR Research Program on Wheat (WHEAT) Program Manager Victor Kommerell was among the attendees.

“It is essential to advocate for science-based decision making,” he said. “Better connecting the dots between national agricultural research agendas and the CGIAR international agenda is important. The G20 wheat initiative and WHEAT have made a good start.”

The threat of pests and the importance of adopting climate smart technology came up as high priorities.

Transboundary pests have become a serious threat to food security, exacerbated by the globalized movement of people and commodities and the changing climate. As Kommerell commented to the attendees, pathogens and pests cause global crop losses of 20 to 30 percent. This has a “double penalty” effect, wasting both food and resources invested in farming inputs.

The International Maize and Wheat Improvement Center (CIMMYT) is particularly focused on pests and diseases threatening maize and wheat, such as Fall armyworm and wheat rust and blast.  Kommerell summarized a number of research-based solutions underway thanks to international collaboration – including building globally-accessible rapid screening facilities and using wild crop relatives as a genetic source for resistance. But non-technical solutions, such as boosting awareness and communicating preventative farming practices are also important.

The agricultural field is especially vulnerable to the effects of changing climate and weather variability, while at the same time heavily contributing as a source of greenhouse gases. Innovative agricultural technologies and practices are essential for sustainable production, climate resilience and carbon sequestration as well as reducing greenhouse gas emissions.  

The key, the attendees concluded in a meeting communiqué, is the open and international exchange of knowledge, experience, and practices. Networks are already in place, but need strengthening at both the regional and international level.

To that end, a task force led by Australia and the United States will develop guidelines for working groups and initiatives designed to mitigate pests and scale adoption of climate smart technologies.

The government of Japan is also taking an active role, with plans to hold international conferences this year to facilitate sharing of experiences, research, and best practices from G20 countries.

Protecting the World’s Wheat – Delivering Genetic Gain in Kenya

In February 2019 filmmaker Chris Knight of International Programs at Cornell University’s College of Agriculture and Life Sciences visited the Kenya Agricultural and Livestock Research Organization – Food Crops Research Institute (KALRO – FCRI) research station in Njoro, Kenya.  Wanting to visually capture how Cornell is working with CIMMYT and a global partnership of more than 25 countries to protect the world’s wheat from diseases and the stress of climate change, he produced the short film Protecting the World’s Wheat – Delivering Genetic Gain in Kenya .

The film features East Africa, a center of genetic diversity for wheat stem rust, a fungal pathogen that causes significant yield losses worldwide. To combat this, partner countries test more than 50,000 experimental wheat lines against stem rust in Kenya every year at the Njoro research station to ensure that newly released wheat varieties will be resistant to emerging virulent races of the stem rust fungus as they evolve and spread.

Farmers and scientists have been fighting stem rust since the domestication of wheat thousands of years ago. This brilliant dance between humans and nature will likely never stop, but by working together we can stay one step ahead of this pesky pathogen. As Ruth Wanyera, Principal Research Scientist at KALRO stated, “(Stem rust) is running, and we’re also running. It’s running, and we’re also running. We have to do something to make sure there’s food in the table. That is where my motivation is. Let’s do something. Let’s feed the world. Let there be food for people to eat, or for people to survive.”